EpiMetal: an open-source graphical web browser tool for easy statistical analyses in epidemiology and metabolomics
Raitakari Olli T; Lehtimäki Terho; Khan Anmar A; Karsikas Mari; Kangas Antti J; Järvelin Marjo-Riitta; Ohukainen Pauli; Ala-Korpela Mika; Meikle Peter J; Kettunen Johannes; Ekholm Jussi; Kähonen Mika; Wang Qin; Kingwell Bronwyn A
EpiMetal: an open-source graphical web browser tool for easy statistical analyses in epidemiology and metabolomics
Raitakari Olli T
Lehtimäki Terho
Khan Anmar A
Karsikas Mari
Kangas Antti J
Järvelin Marjo-Riitta
Ohukainen Pauli
Ala-Korpela Mika
Meikle Peter J
Kettunen Johannes
Ekholm Jussi
Kähonen Mika
Wang Qin
Kingwell Bronwyn A
OXFORD UNIV PRESS
Julkaisun pysyvä osoite on:
https://urn.fi/URN:NBN:fi-fe2021042826347
https://urn.fi/URN:NBN:fi-fe2021042826347
Tiivistelmä
Motivation: An intuitive graphical interface that allows statistical analyses and visualizations of extensive data without any knowledge of dedicated statistical software or programming.
Implementation: EpiMetal is a single-page web application written in JavaScript, to be used via a modern desktop web browser.
General features: Standard epidemiological analyses and self-organizing maps for datadriven metabolic profiling are included. Multiple extensive datasets with an arbitrary number of continuous and category variables can be integrated with the software. Any snapshot of the analyses can be saved and shared with others via a www-link. We demonstrate the usage of EpiMetal using pilot data with over 500 quantitative molecular measures for each sample as well as in two large-scale epidemiological cohorts (N>10 000).
Availability: The software usage exemplar and the pilot data are open access online at [http://EpiMetal.computationalmedicine.fi ]. MIT licensed source code is available at the Github repository at [https://github.com/amergin/epimetal].
Kokoelmat
- Rinnakkaistallenteet [19207]