The small GTPase RAB24 and vesicle trafficking from the endoplasmic reticulum to the Golgi apparatus
| dc.contributor.author | Antony, Anson | |
| dc.contributor.department | fi=Bioteknologian laitos|en=Department of Life Technologies| | |
| dc.contributor.faculty | fi=Teknillinen tiedekunta|en=Faculty of Technology| | |
| dc.contributor.studysubject | fi=Molecular Systems Biology|en=Molecular Systems Biology| | |
| dc.date.accessioned | 2025-05-14T21:04:28Z | |
| dc.date.available | 2025-05-14T21:04:28Z | |
| dc.date.issued | 2025-04-22 | |
| dc.description.abstract | The small GTPase RAB24 is an unusual RAB protein, which is originally reported to localize in the endoplasmic reticulum (ER), cis-Golgi region and late endosomal structures. Several studies have shown that RAB24 is involved in autophagy, endocytosis and cell division, but its association to the cis-Golgi has not been studied. However, preliminary data from the host laboratory implied that RAB24 may play a role in ER-Golgi trafficking. Therefore, the aims of this thesis were to study the structural integrity and location of the Golgi complex in wild-type (WT) and RAB24-knockout (KO) hepatocyte cell lines, and to investigate the role of RAB24 in the ER-Golgi vesicle transport. The integrity of the Golgi ribbons was analyzed by culturing WT and RAB24-KO Huh7 cells at +37°C and +40°C, and staining the cells using an antibody against the Golgi marker GM130. A GFP-tagged, temperature-sensitive vesicular stomatitis virus glycoprotein (VSVG-ts045-eGFP) was used to conduct the ER-Golgi protein trafficking assay. At +40 °C, VSVG-ts045-eGFP protein cannot exit the ER due to misfolding. When the cells are shifted to +32 °C, the synchronized transport of the protein from the ER to the Golgi can be monitored. For the vesicle trafficking assay, cells expressing VSVG-ts045-eGFP were collected at different time points after shifting from +40 °C to +32 °C, and the colocalization of eGFP and the Golgi marker GM130 were analyzed using confocal microscopy. Further, deglycosylation assay was performed using endoglycosidase H (Endo H) enzyme that removes N-linked glycans from proteins that have not exited the ER. Western blotting was used to analyze the presence of VSVG-ts045-eGFP protein at the ER and post-ER compartments in WT and RAB24-KO cells at different time points after shifting the cells from +40°C to +32°C. At +37 °C, the Golgi ribbons were positioned on top of the nucleus in WT cells, whereas in the RAB24-KO cells, the Golgi ribbons localized around the nucleus. At +40 °C, the GM130-positive Golgi ribbons were fragmented in both WT and RAB24-KO cells, likely due to heat stress. Confocal microscopy revealed retarded ER-to-Golgi trafficking of VSVG-ts045-eGFP in RAB24-KO cells compared with the WT cells. However, no differences were observed in the Endo H sensitivity assay between the two cell lines. The results suggest that RAB24 may play a role in positioning of the Golgi apparatus in relation to the nucleus, and in ER-to-cis-Golgi trafficking. | |
| dc.format.extent | 51 | |
| dc.identifier.olddbid | 198121 | |
| dc.identifier.oldhandle | 10024/181159 | |
| dc.identifier.uri | https://www.utupub.fi/handle/11111/25673 | |
| dc.identifier.urn | URN:NBN:fi-fe2025051442728 | |
| dc.language.iso | eng | |
| dc.rights | fi=Julkaisu on tekijänoikeussäännösten alainen. Teosta voi lukea ja tulostaa henkilökohtaista käyttöä varten. Käyttö kaupallisiin tarkoituksiin on kielletty.|en=This publication is copyrighted. You may download, display and print it for Your own personal use. Commercial use is prohibited.| | |
| dc.rights.accessrights | suljettu | |
| dc.source.identifier | https://www.utupub.fi/handle/10024/181159 | |
| dc.subject | RAB24, Golgi, endoplasmic reticulum, vesicle trafficking, VSVG-ts045-eGFP, endoglycosidase H, deglycosylation, cancer | |
| dc.title | The small GTPase RAB24 and vesicle trafficking from the endoplasmic reticulum to the Golgi apparatus | |
| dc.type.ontasot | fi=Pro gradu -tutkielma|en=Master's thesis| |
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