Cost-effective survival prediction for patients with advanced prostate cancer using clinical trial and real-world hospital registry datasets

dc.contributor.authorMika Murtojärvi
dc.contributor.authorAnni S. Halkola
dc.contributor.authorAntti Airola
dc.contributor.authorTeemu D. Laajala
dc.contributor.authorTuomas Mirtti
dc.contributor.authorTero Aittokallio
dc.contributor.authorTapio Pahikkala
dc.contributor.organizationfi=matematiikka|en=Mathematics|
dc.contributor.organizationfi=sovellettu matematiikka|en=Applied mathematics|
dc.contributor.organizationfi=terveysteknologia|en=Health Technology|
dc.contributor.organizationfi=tietojenkäsittelytiede|en=Computer Science|
dc.contributor.organizationfi=tyks, vsshp|en=tyks, varha|
dc.contributor.organization-code1.2.246.10.2458963.20.23479734818
dc.contributor.organization-code1.2.246.10.2458963.20.28696315432
dc.contributor.organization-code1.2.246.10.2458963.20.41687507875
dc.contributor.organization-code1.2.246.10.2458963.20.48078768388
dc.converis.publication-id43869141
dc.converis.urlhttps://research.utu.fi/converis/portal/Publication/43869141
dc.date.accessioned2022-10-28T14:02:51Z
dc.date.available2022-10-28T14:02:51Z
dc.description.abstract<div><h3>Introduction</h3><p>Predictive survival modeling offers systematic tools for clinical decision-making and individualized tailoring of treatment strategies to improve patient outcomes while reducing overall healthcare costs. In 2015, a number of machine learning and statistical models were benchmarked in the DREAM 9.5 Prostate Cancer Challenge, based on open clinical trial data for metastatic castration resistant prostate cancer (mCRPC). However, applying these models into clinical practice poses a practical challenge due to the inclusion of a large number of model variables, some of which are not routinely monitored or are expensive to measure.</p></div><div><h3>Objectives</h3><p>To develop cost-specified variable selection algorithms for constructing cost-effective prognostic models of overall survival that still preserve sufficient model performance for clinical decision making.</p></div><div><h3>Methods</h3><p>Penalized Cox regression models were used for the survival prediction. For the variable selection, we implemented two algorithms: (i) LASSO regularization approach; and (ii) a greedy cost-specified variable selection algorithm. The models were compared in three cohorts of mCRPC patients from randomized clinical trials (RCT), as well as in a real-world cohort (RWC) of advanced prostate cancer patients treated at the Turku University Hospital. Hospital laboratory expenses were utilized as a reference for computing the costs of introducing new variables into the models.</p></div><div><h3>Results</h3><p>Compared to measuring the full set of clinical variables, economic costs could be reduced by half without a significant loss of model performance. The greedy algorithm outperformed the LASSO-based variable selection with the lowest tested budgets. The overall top performance was higher with the LASSO algorithm.</p></div><div><h3>Conclusion</h3><p>The cost-specified variable selection offers significant budget optimization capability for the real-world survival prediction without compromising the predictive power of the model.</p></div>
dc.identifier.eissn1872-8243
dc.identifier.jour-issn1386-5056
dc.identifier.olddbid185940
dc.identifier.oldhandle10024/169034
dc.identifier.urihttps://www.utupub.fi/handle/11111/42727
dc.identifier.urlhttp://www.sciencedirect.com/science/article/pii/S1386505618311857
dc.identifier.urnURN:NBN:fi-fe2021042824823
dc.language.isoen
dc.okm.affiliatedauthorMurtojärvi, Mika
dc.okm.affiliatedauthorHalkola, Anni
dc.okm.affiliatedauthorLaajala, Daniel
dc.okm.affiliatedauthorAittokallio, Tero
dc.okm.affiliatedauthorPahikkala, Tapio
dc.okm.affiliatedauthorDataimport, tyks, vsshp
dc.okm.affiliatedauthorAirola, Antti
dc.okm.discipline112 Statistics and probabilityen_GB
dc.okm.discipline113 Computer and information sciencesen_GB
dc.okm.discipline3122 Cancersen_GB
dc.okm.discipline3141 Health care scienceen_GB
dc.okm.discipline112 Tilastotiedefi_FI
dc.okm.discipline113 Tietojenkäsittely ja informaatiotieteetfi_FI
dc.okm.discipline3122 Syöpätauditfi_FI
dc.okm.discipline3141 Terveystiedefi_FI
dc.okm.internationalcopublicationnot an international co-publication
dc.okm.internationalityInternational publication
dc.okm.typeA1 ScientificArticle
dc.publisherElsevier Ireland Ltd
dc.publisher.countryIrelanden_GB
dc.publisher.countryIrlantifi_FI
dc.publisher.country-codeIE
dc.relation.articlenumberUNSP 104014
dc.relation.doi10.1016/j.ijmedinf.2019.104014
dc.relation.ispartofjournalInternational Journal of Medical Informatics
dc.relation.volume133
dc.source.identifierhttps://www.utupub.fi/handle/10024/169034
dc.titleCost-effective survival prediction for patients with advanced prostate cancer using clinical trial and real-world hospital registry datasets
dc.year.issued2020

Tiedostot

Näytetään 1 - 1 / 1
Ladataan...
Name:
1-s2.0-S1386505618311857-main.pdf
Size:
2.76 MB
Format:
Adobe Portable Document Format
Description:
Publisher's PDF