Mapping of the three-dimensional lymphatic microvasculature in bladder tumours using light-sheet microscopy
| dc.contributor.author | Tanaka Nobuyuki | |
| dc.contributor.author | Kaczynska Dagmara | |
| dc.contributor.author | Kanatani Shigeaki | |
| dc.contributor.author | Sahlgren Cecilia | |
| dc.contributor.author | Mitura Przemysław | |
| dc.contributor.author | Stepulak Andrzej | |
| dc.contributor.author | Miyakawa Ayako | |
| dc.contributor.author | Wiklund Peter | |
| dc.contributor.author | Uhlén Per | |
| dc.contributor.organization | fi=Turun biotiedekeskus|en=Turku Bioscience Centre| | |
| dc.contributor.organization | fi=talouspalvelut|en=Financial Services| | |
| dc.contributor.organization-code | 1.2.246.10.2458963.20.48543439227 | |
| dc.converis.publication-id | 30928049 | |
| dc.converis.url | https://research.utu.fi/converis/portal/Publication/30928049 | |
| dc.date.accessioned | 2022-10-28T14:14:19Z | |
| dc.date.available | 2022-10-28T14:14:19Z | |
| dc.description.abstract | <div><h3><br></h3><p>Background: Cancers are heterogeneous and contain various types of irregular structures that can go undetected when examining them with standard two-dimensional microscopes. Studies of intricate networks of vasculature systems, e.g., the tumour lymphatic microvessels, benefit largely from three-dimensional imaging data analysis.<br><br>Methods: The new DIPCO (Diagnosing Immunolabeled Paraffin-Embedded Cleared Organs) imaging platform uses three-dimensional light-sheet microscopy and whole-mount immunolabelling of cleared samples to study proteins and micro-anatomies deep inside of tumours.<br><br>Results: Here, we uncovered the whole three-dimensional lymphatic microvasculature of formalin-fixed paraffin-embedded (FFPE) tumours from a cohort of 30 patients with bladder cancer. Our results revealed more heterogeneous spatial deviations in more advanced bladder tumours. We also showed that three-dimensional imaging could determine tumour stage and identify vascular or lymphatic system invasion with higher accuracy than standard two-dimensional histological diagnostic methods. There was no association between sample storage times and outcomes, demonstrating that the DIPCO pipeline could be successfully applied on old FFPE samples.<br><br>Conclusions: Studying tumour samples with three-dimensional imaging could help us understand the pathological nature of cancers and provide essential information that might improve the accuracy of cancer staging.</p></div> | |
| dc.format.pagerange | 995 | |
| dc.format.pagerange | 999 | |
| dc.identifier.eissn | 1532-1827 | |
| dc.identifier.jour-issn | 0007-0920 | |
| dc.identifier.olddbid | 187096 | |
| dc.identifier.oldhandle | 10024/170190 | |
| dc.identifier.uri | https://www.utupub.fi/handle/11111/42384 | |
| dc.identifier.url | http://www.nature.com/articles/s41416-018-0016-y | |
| dc.identifier.urn | URN:NBN:fi-fe2021042719059 | |
| dc.language.iso | en | |
| dc.okm.affiliatedauthor | Sahlgren, Cecilia | |
| dc.okm.affiliatedauthor | Dataimport, Biotekniikan keskuksen yhteiset | |
| dc.okm.discipline | 3122 Cancers | en_GB |
| dc.okm.discipline | 3122 Syöpätaudit | fi_FI |
| dc.okm.internationalcopublication | international co-publication | |
| dc.okm.internationality | International publication | |
| dc.okm.type | A1 ScientificArticle | |
| dc.publisher | Nature Publishing Group | |
| dc.publisher.country | United Kingdom | en_GB |
| dc.publisher.country | Britannia | fi_FI |
| dc.publisher.country-code | GB | |
| dc.relation.doi | 10.1038/s41416-018-0016-y | |
| dc.relation.ispartofjournal | British Journal of Cancer | |
| dc.relation.issue | 7 | |
| dc.relation.volume | 118 | |
| dc.source.identifier | https://www.utupub.fi/handle/10024/170190 | |
| dc.title | Mapping of the three-dimensional lymphatic microvasculature in bladder tumours using light-sheet microscopy | |
| dc.year.issued | 2018 |
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