Mapping of the three-dimensional lymphatic microvasculature in bladder tumours using light-sheet microscopy

dc.contributor.authorTanaka Nobuyuki
dc.contributor.authorKaczynska Dagmara
dc.contributor.authorKanatani Shigeaki
dc.contributor.authorSahlgren Cecilia
dc.contributor.authorMitura Przemysław
dc.contributor.authorStepulak Andrzej
dc.contributor.authorMiyakawa Ayako
dc.contributor.authorWiklund Peter
dc.contributor.authorUhlén Per
dc.contributor.organizationfi=Turun biotiedekeskus|en=Turku Bioscience Centre|
dc.contributor.organizationfi=talouspalvelut|en=Financial Services|
dc.contributor.organization-code1.2.246.10.2458963.20.48543439227
dc.converis.publication-id30928049
dc.converis.urlhttps://research.utu.fi/converis/portal/Publication/30928049
dc.date.accessioned2022-10-28T14:14:19Z
dc.date.available2022-10-28T14:14:19Z
dc.description.abstract<div><h3><br></h3><p>Background: Cancers are heterogeneous and contain various types of irregular structures that can go undetected when examining them with standard two-dimensional microscopes. Studies of intricate networks of vasculature systems, e.g., the tumour lymphatic microvessels, benefit largely from three-dimensional imaging data analysis.<br><br>Methods: The new DIPCO (Diagnosing Immunolabeled Paraffin-Embedded Cleared Organs) imaging platform uses three-dimensional light-sheet microscopy and whole-mount immunolabelling of cleared samples to study proteins and micro-anatomies deep inside of tumours.<br><br>Results: Here, we uncovered the whole three-dimensional lymphatic microvasculature of formalin-fixed paraffin-embedded (FFPE) tumours from a cohort of 30 patients with bladder cancer. Our results revealed more heterogeneous spatial deviations in more advanced bladder tumours. We also showed that three-dimensional imaging could determine tumour stage and identify vascular or lymphatic system invasion with higher accuracy than standard two-dimensional histological diagnostic methods. There was no association between sample storage times and outcomes, demonstrating that the DIPCO pipeline could be successfully applied on old FFPE samples.<br><br>Conclusions: Studying tumour samples with three-dimensional imaging could help us understand the pathological nature of cancers and provide essential information that might improve the accuracy of cancer staging.</p></div>
dc.format.pagerange995
dc.format.pagerange999
dc.identifier.eissn1532-1827
dc.identifier.jour-issn0007-0920
dc.identifier.olddbid187096
dc.identifier.oldhandle10024/170190
dc.identifier.urihttps://www.utupub.fi/handle/11111/42384
dc.identifier.urlhttp://www.nature.com/articles/s41416-018-0016-y
dc.identifier.urnURN:NBN:fi-fe2021042719059
dc.language.isoen
dc.okm.affiliatedauthorSahlgren, Cecilia
dc.okm.affiliatedauthorDataimport, Biotekniikan keskuksen yhteiset
dc.okm.discipline3122 Cancersen_GB
dc.okm.discipline3122 Syöpätauditfi_FI
dc.okm.internationalcopublicationinternational co-publication
dc.okm.internationalityInternational publication
dc.okm.typeA1 ScientificArticle
dc.publisherNature Publishing Group
dc.publisher.countryUnited Kingdomen_GB
dc.publisher.countryBritanniafi_FI
dc.publisher.country-codeGB
dc.relation.doi10.1038/s41416-018-0016-y
dc.relation.ispartofjournalBritish Journal of Cancer
dc.relation.issue7
dc.relation.volume118
dc.source.identifierhttps://www.utupub.fi/handle/10024/170190
dc.titleMapping of the three-dimensional lymphatic microvasculature in bladder tumours using light-sheet microscopy
dc.year.issued2018

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