Uniting biobank resources reveals novel genetic pathways modulating susceptibility for atopic dermatitis

dc.contributor.authorSliz Eeva
dc.contributor.authorHuilaja Laura
dc.contributor.authorPasanen Anu
dc.contributor.authorLaisk Triin
dc.contributor.authorReimann Ene
dc.contributor.authorMägi Reedik
dc.contributor.authorFinnGen
dc.contributor.authorEstonian Biobank Research Team
dc.contributor.authorHannula-Jouppi Katariina
dc.contributor.authorPeltonen Sirkku
dc.contributor.authorSalmi Teea
dc.contributor.authorKoulu Leena
dc.contributor.authorTasanen Kaisa
dc.contributor.authorKettunen Johannes
dc.contributor.organizationfi=iho- ja sukupuolitautioppi|en=Dermatology and Venereology|
dc.contributor.organizationfi=lääketieteellinen tiedekunta|en=Faculty of Medicine|
dc.contributor.organizationfi=tyks, vsshp|en=tyks, varha|
dc.contributor.organization-code1.2.246.10.2458963.20.13290506867
dc.contributor.organization-code1.2.246.10.2458963.20.39855016430
dc.converis.publication-id67752966
dc.converis.urlhttps://research.utu.fi/converis/portal/Publication/67752966
dc.date.accessioned2022-10-28T13:42:04Z
dc.date.available2022-10-28T13:42:04Z
dc.description.abstract<p><strong></strong><br></p><p><strong>Background: </strong>Atopic dermatitis (AD) is a common chronic inflammatory skin disease with high heritability. Previous genome-wide association studies have identified several loci predisposing to AD. These findings explain approximately 30% of the variance in AD susceptibility, suggesting that further work is required to fully understand the genetic underpinnings.</p><p><strong>Objective: </strong>We sought to gain additional understanding of the genetic contribution to AD risk by using biobank resources.</p><p><strong>Methods: </strong>We completed a genome-wide meta-analysis of AD in 796,661 individuals (N<sub>cases</sub> = 22,474) from the FinnGen study, the Estonian Biobank, and the UK Biobank. We further performed downstream in silico analyses to characterize the risk variants at the novel loci.</p><p><strong>Results: </strong>We report 30 loci associating with AD (P < 5 × 10<sup>-8</sup>), 5 of which are novel. In 2 of the novel loci, we identified missense mutations with deleterious predictions in desmocollin 1 and serpin family B member 7, genes encoding proteins crucial to epidermal strength and integrity.</p><p><strong>Conclusions: </strong>These findings elucidate novel genetic pathways involved in AD pathophysiology. The likely involvement of desmocollin 1 and serpin family B member 7 in AD pathogenesis may offer opportunities for the development of novel treatment strategies for AD in the future.</p><p><strong>Keywords: </strong>Atopic dermatitis; DSC1; FinnGen; SERPINB7; genome-wide association.</p><p>Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.</p>
dc.format.pagerange1105
dc.format.pagerange1112
dc.identifier.eissn1085-8725
dc.identifier.jour-issn0091-6749
dc.identifier.olddbid183724
dc.identifier.oldhandle10024/166818
dc.identifier.urihttps://www.utupub.fi/handle/11111/41027
dc.identifier.urnURN:NBN:fi-fe2021120158486
dc.language.isoen
dc.okm.affiliatedauthorPeltonen, Sirkku
dc.okm.affiliatedauthorKoulu, Leena
dc.okm.affiliatedauthorDataimport, tyks, vsshp
dc.okm.discipline3111 Biomedicineen_GB
dc.okm.discipline3121 Internal medicineen_GB
dc.okm.discipline3111 Biolääketieteetfi_FI
dc.okm.discipline3121 Sisätauditfi_FI
dc.okm.internationalcopublicationinternational co-publication
dc.okm.internationalityInternational publication
dc.okm.typeA1 ScientificArticle
dc.publisherElsevier Inc.
dc.publisher.countryUnited Statesen_GB
dc.publisher.countryYhdysvallat (USA)fi_FI
dc.publisher.country-codeUS
dc.relation.doi10.1016/j.jaci.2021.07.043
dc.relation.ispartofjournalJournal of Allergy and Clinical Immunology
dc.relation.issue3
dc.relation.volume149
dc.source.identifierhttps://www.utupub.fi/handle/10024/166818
dc.titleUniting biobank resources reveals novel genetic pathways modulating susceptibility for atopic dermatitis
dc.year.issued2022

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