Uniting biobank resources reveals novel genetic pathways modulating susceptibility for atopic dermatitis
| dc.contributor.author | Sliz Eeva | |
| dc.contributor.author | Huilaja Laura | |
| dc.contributor.author | Pasanen Anu | |
| dc.contributor.author | Laisk Triin | |
| dc.contributor.author | Reimann Ene | |
| dc.contributor.author | Mägi Reedik | |
| dc.contributor.author | FinnGen | |
| dc.contributor.author | Estonian Biobank Research Team | |
| dc.contributor.author | Hannula-Jouppi Katariina | |
| dc.contributor.author | Peltonen Sirkku | |
| dc.contributor.author | Salmi Teea | |
| dc.contributor.author | Koulu Leena | |
| dc.contributor.author | Tasanen Kaisa | |
| dc.contributor.author | Kettunen Johannes | |
| dc.contributor.organization | fi=iho- ja sukupuolitautioppi|en=Dermatology and Venereology| | |
| dc.contributor.organization | fi=lääketieteellinen tiedekunta|en=Faculty of Medicine| | |
| dc.contributor.organization | fi=tyks, vsshp|en=tyks, varha| | |
| dc.contributor.organization-code | 1.2.246.10.2458963.20.13290506867 | |
| dc.contributor.organization-code | 1.2.246.10.2458963.20.39855016430 | |
| dc.converis.publication-id | 67752966 | |
| dc.converis.url | https://research.utu.fi/converis/portal/Publication/67752966 | |
| dc.date.accessioned | 2022-10-28T13:42:04Z | |
| dc.date.available | 2022-10-28T13:42:04Z | |
| dc.description.abstract | <p><strong></strong><br></p><p><strong>Background: </strong>Atopic dermatitis (AD) is a common chronic inflammatory skin disease with high heritability. Previous genome-wide association studies have identified several loci predisposing to AD. These findings explain approximately 30% of the variance in AD susceptibility, suggesting that further work is required to fully understand the genetic underpinnings.</p><p><strong>Objective: </strong>We sought to gain additional understanding of the genetic contribution to AD risk by using biobank resources.</p><p><strong>Methods: </strong>We completed a genome-wide meta-analysis of AD in 796,661 individuals (N<sub>cases</sub> = 22,474) from the FinnGen study, the Estonian Biobank, and the UK Biobank. We further performed downstream in silico analyses to characterize the risk variants at the novel loci.</p><p><strong>Results: </strong>We report 30 loci associating with AD (P < 5 × 10<sup>-8</sup>), 5 of which are novel. In 2 of the novel loci, we identified missense mutations with deleterious predictions in desmocollin 1 and serpin family B member 7, genes encoding proteins crucial to epidermal strength and integrity.</p><p><strong>Conclusions: </strong>These findings elucidate novel genetic pathways involved in AD pathophysiology. The likely involvement of desmocollin 1 and serpin family B member 7 in AD pathogenesis may offer opportunities for the development of novel treatment strategies for AD in the future.</p><p><strong>Keywords: </strong>Atopic dermatitis; DSC1; FinnGen; SERPINB7; genome-wide association.</p><p>Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.</p> | |
| dc.format.pagerange | 1105 | |
| dc.format.pagerange | 1112 | |
| dc.identifier.eissn | 1085-8725 | |
| dc.identifier.jour-issn | 0091-6749 | |
| dc.identifier.olddbid | 183724 | |
| dc.identifier.oldhandle | 10024/166818 | |
| dc.identifier.uri | https://www.utupub.fi/handle/11111/41027 | |
| dc.identifier.urn | URN:NBN:fi-fe2021120158486 | |
| dc.language.iso | en | |
| dc.okm.affiliatedauthor | Peltonen, Sirkku | |
| dc.okm.affiliatedauthor | Koulu, Leena | |
| dc.okm.affiliatedauthor | Dataimport, tyks, vsshp | |
| dc.okm.discipline | 3111 Biomedicine | en_GB |
| dc.okm.discipline | 3121 Internal medicine | en_GB |
| dc.okm.discipline | 3111 Biolääketieteet | fi_FI |
| dc.okm.discipline | 3121 Sisätaudit | fi_FI |
| dc.okm.internationalcopublication | international co-publication | |
| dc.okm.internationality | International publication | |
| dc.okm.type | A1 ScientificArticle | |
| dc.publisher | Elsevier Inc. | |
| dc.publisher.country | United States | en_GB |
| dc.publisher.country | Yhdysvallat (USA) | fi_FI |
| dc.publisher.country-code | US | |
| dc.relation.doi | 10.1016/j.jaci.2021.07.043 | |
| dc.relation.ispartofjournal | Journal of Allergy and Clinical Immunology | |
| dc.relation.issue | 3 | |
| dc.relation.volume | 149 | |
| dc.source.identifier | https://www.utupub.fi/handle/10024/166818 | |
| dc.title | Uniting biobank resources reveals novel genetic pathways modulating susceptibility for atopic dermatitis | |
| dc.year.issued | 2022 |
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