A systematic approach to study the effects of acquisition parameters and biological factors on computerized mammography analysis using ex vivo human tissue: A protocol description

dc.contributor.authorHernandez, Nicole
dc.contributor.authorPakarinen, Tomppa
dc.contributor.authorSalminen, Annukka
dc.contributor.authorCastro, Santiago Laguna
dc.contributor.authorKarhunen-Enckell, Ulla
dc.contributor.authorHannula, Markus
dc.contributor.authorHeljasvaara, Ritva
dc.contributor.authorHyttinen, Jari
dc.contributor.authorJoensuu, Katriina
dc.contributor.authorJokelainen, Otto
dc.contributor.authorJukkola, Arja
dc.contributor.authorKarppinen, Sanna-Maria
dc.contributor.authorLindgren, Auni
dc.contributor.authorLääperi, Eero
dc.contributor.authorPeuhu, Emilia
dc.contributor.authorPihlajaniemi, Taina
dc.contributor.authorPrunskaite-Hyyryläinen, Renata
dc.contributor.authorRilla, Kirsi
dc.contributor.authorRuusuvuori, Pekka
dc.contributor.authorLatonen, Leena
dc.contributor.authorTolonen, Teemu
dc.contributor.authorValkonen, Masi
dc.contributor.authorValkonen, Mira
dc.contributor.authorVuorlaakso, Miska
dc.contributor.authorPertuz, Said
dc.contributor.authorRinta-Kiikka, Irina
dc.contributor.authorArponen, Otso
dc.contributor.organizationfi=biolääketieteen laitos|en=Institute of Biomedicine|
dc.contributor.organization-code1.2.246.10.2458963.20.77952289591
dc.converis.publication-id499845864
dc.converis.urlhttps://research.utu.fi/converis/portal/Publication/499845864
dc.date.accessioned2026-01-21T14:33:17Z
dc.date.available2026-01-21T14:33:17Z
dc.description.abstract<p><b>Background:</b><br></p><p> Mammography is the most common imaging modality for the detection of breast cancer. Artificial intelligence algorithms for mammography analysis have shown promising performance for breast cancer risk assessment and lesion detection and classification; however, these models often fail the test of external validation. The evidence points to variations in image acquisition-known as the batch effect-as a main contributing factor to the lack of the models generalization and robustness. However, studies on the effects of acquisition in the mammogram have been limited due to lack of appropriate datasets. This prospective, exploratory, non-randomized study aims to study how biological and non-biological sources of heterogeneity affect the mammogram and, in turn, the computerized models for mammography analysis.<br></p><p><b>Methodology: </b><br></p><p>This study will collect breast samples from 200 participants that will undergo breast resection as per clinical indications. Each sample will undergo the mammography imaging procedure several times to obtain mammograms with different combinations of imaging parameters. The resulting dataset will be used for the statistical analysis of the impact of imaging parameters in mammographic texture features and the computerized analysis of mammograms. Furthermore, biological information will be collected from the resected breast samples to study their relation to mammographic texture features.<br></p><p><b>Discussion: </b><br></p><p>This study will add to the understanding of the effect of different sources of heterogeneity on mammography, ultimately aiding in the future development of robust computerized analysis models.</p>
dc.identifier.eissn1932-6203
dc.identifier.olddbid213391
dc.identifier.oldhandle10024/196409
dc.identifier.urihttps://www.utupub.fi/handle/11111/55269
dc.identifier.urlhttps://doi.org/10.1371/journal.pone.0321658
dc.identifier.urnURN:NBN:fi-fe202601216503
dc.language.isoen
dc.okm.affiliatedauthorPeuhu, Emilia
dc.okm.affiliatedauthorLatonen, Leena
dc.okm.affiliatedauthorRuusuvuori, Pekka
dc.okm.affiliatedauthorValkonen, Masi
dc.okm.affiliatedauthorValkonen, Mira
dc.okm.discipline3126 Surgery, anesthesiology, intensive care, radiologyen_GB
dc.okm.discipline3126 Kirurgia, anestesiologia, tehohoito, radiologiafi_FI
dc.okm.internationalcopublicationinternational co-publication
dc.okm.internationalityInternational publication
dc.okm.typeA1 ScientificArticle
dc.publisherPublic Library of Science
dc.publisher.countryUnited Statesen_GB
dc.publisher.countryYhdysvallat (USA)fi_FI
dc.publisher.country-codeUS
dc.publisher.placeSAN FRANCISCO
dc.relation.articlenumbere0321658
dc.relation.doi10.1371/journal.pone.0321658
dc.relation.ispartofjournalPLoS ONE
dc.relation.issue8
dc.relation.volume20
dc.source.identifierhttps://www.utupub.fi/handle/10024/196409
dc.titleA systematic approach to study the effects of acquisition parameters and biological factors on computerized mammography analysis using ex vivo human tissue: A protocol description
dc.year.issued2025

Tiedostot

Näytetään 1 - 1 / 1
Ladataan...
Name:
journal.pone.0321658.pdf
Size:
801.46 KB
Format:
Adobe Portable Document Format