New nanoparticle aided glycovariant biomarker tools to detect extracellular vesicles as a liquid biopsy for early diagnosis of bladder cancer

dc.contributor.authorEsti, Israt
dc.contributor.departmentfi=Bioteknologian laitos|en=Department of Life Technologies|
dc.contributor.facultyfi=Teknillinen tiedekunta|en=Faculty of Technology|
dc.contributor.studysubjectfi=Molecular Systems Biology|en=Molecular Systems Biology|
dc.date.accessioned2024-06-29T21:01:55Z
dc.date.available2024-06-29T21:01:55Z
dc.date.issued2024-06-25
dc.description.abstractBladder cancer (BlCa) remains a significant health concern worldwide, with a high incidence rate and substantial morbidity and mortality. Early detection of bladder cancer is critical for timely intervention and improved patient outcomes. Therefore, there is an urgent need for non-invasive and reliable biomarkers that can enhance the accuracy and efficiency of bladder cancer detection. The aim of this project is to develop and validate highly sensitive nanoparticle-based time-resolved fluorometry immunoassay (TRFIA) to detect bladder cancer patients compared to clinically challenging benign samples. This project focused on the development of a combination of biotinylated antibody as a capture and europium chelate-doped nanoparticles (NPs)-coated lectin as a tracer used in immunoassay for the detection of BlCa patients. Captures such as cell adhesion molecules (EpCAM & CAM1) and cancer-associated integrin alpha-3 (ITGA-3) markers in combination with Ulex Europeaus Agglutinin (UEA) lectin were tested to find out the best functional biomarkers and their corresponding potential assays. Then the functional biomarker combinations were characterized and validated using cell culture medium (CCM) derived from cancer cell lines as well as pooled serum of benign and BlCa patients. We have observed fold changes with various salts and buffer optimization. Specifically, when employing UEA lectin, we obtained p-values of .03, .04 and .05 for EpCAM, CAM1 & ITGA-3 respectively. The outcomes of this project highlight the significance of systemically screening of UEA lectin with different captures to improve the development of a glycovariant assay for the detection of bladder cancer patients.
dc.format.extent53
dc.identifier.olddbid195687
dc.identifier.oldhandle10024/178739
dc.identifier.urihttps://www.utupub.fi/handle/11111/25373
dc.identifier.urnURN:NBN:fi-fe2024062859236
dc.language.isoeng
dc.rightsfi=Julkaisu on tekijänoikeussäännösten alainen. Teosta voi lukea ja tulostaa henkilökohtaista käyttöä varten. Käyttö kaupallisiin tarkoituksiin on kielletty.|en=This publication is copyrighted. You may download, display and print it for Your own personal use. Commercial use is prohibited.|
dc.rights.accessrightssuljettu
dc.source.identifierhttps://www.utupub.fi/handle/10024/178739
dc.subjectbladder cancer, extracellular vesicle, TRFIA, integrin, cell-adhesion molecule, nano-particles, lectin, optimization
dc.titleNew nanoparticle aided glycovariant biomarker tools to detect extracellular vesicles as a liquid biopsy for early diagnosis of bladder cancer
dc.type.ontasotfi=Pro gradu -tutkielma|en=Master's thesis|

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