Quantification of Myocardial Blood Flow by Machine Learning Analysis of Modified Dual Bolus MRI Examination

dc.contributor.authorMinna Husso
dc.contributor.authorIsaac O. Afara
dc.contributor.authorMikko J. Nissi
dc.contributor.authorAntti Kuivanen
dc.contributor.authorPaavo Halonen
dc.contributor.authorMiikka Tarkia
dc.contributor.authorJarmo Teuho
dc.contributor.authorVirva Saunavaara
dc.contributor.authorPauli Vainio
dc.contributor.authorPetri Sipola
dc.contributor.authorHannu Manninen
dc.contributor.authorSeppo Ylä-Herttuala
dc.contributor.authorJuhani Knuuti
dc.contributor.authorJuha Töyräs
dc.contributor.organizationfi=PET-keskus|en=Turku PET Centre|
dc.contributor.organizationfi=biolääketieteen laitos|en=Institute of Biomedicine|
dc.contributor.organizationfi=tyks, vsshp|en=tyks, varha|
dc.contributor.organization-code1.2.246.10.2458963.20.14646305228
dc.contributor.organization-code1.2.246.10.2458963.20.77952289591
dc.contributor.organization-code2609810
dc.converis.publication-id49211633
dc.converis.urlhttps://research.utu.fi/converis/portal/Publication/49211633
dc.date.accessioned2025-08-28T02:52:18Z
dc.date.available2025-08-28T02:52:18Z
dc.description.abstract<p>Contrast-enhanced magnetic resonance imaging (MRI) is a promising method for estimating myocardial blood flow (MBF). However, it is often affected by noise from imaging artefacts, such as dark rim artefact obscuring relevant features. Machine learning enables extracting important features from such noisy data and is increasingly applied in areas where traditional approaches are limited. In this study, we investigate the capacity of machine learning, particularly support vector machines (SVM) and random forests (RF), for estimating MBF from tissue impulse response signal in an animal model. Domestic pigs (<i>n</i> = 5) were subjected to contrast enhanced first pass MRI (MRI-FP) and the impulse response at different regions of the myocardium (<i>n</i> = 24/pig) were evaluated at rest (<i>n</i> = 120) and stress (<i>n</i> = 96). Reference MBF was then measured using positron emission tomography (PET). Since the impulse response may include artefacts, classification models based on SVM and RF were developed to discriminate noisy signal. In addition, regression models based on SVM, RF and linear regression (for comparison) were developed for estimating MBF from the impulse response at rest and stress. The classification and regression models were trained on data from 4 pigs (<i>n</i> = 168) and tested on 1 pig (<i>n</i> = 48). Models based on SVM and RF outperformed linear regression, with higher correlation (R<sup>2</sup><sub>SVM</sub>  = 0.81, R<sup>2</sup><sub>RF</sub>  = 0.74, R<sup>2</sup><sub>linear_regression</sub>  = 0.60; <i><sub>ρSVM</sub></i> = 0.76, <i><sub>ρRF</sub></i> = 0.76, <i><sub>ρlinear_regression</sub></i> = 0.71) and lower error (RMSE<sub>SVM</sub> = 0.67 mL/g/min, RMSE<sub>RF</sub> = 0.77 mL/g/min, RMSE<sub>linear_regression</sub> = 0.96 mL/g/min) for predicting MBF from MRI impulse response signal. Classifier based on SVM was optimal for detecting impulse response signals with artefacts (accuracy = 92%). Modified dual bolus MRI signal, combined with machine learning, has potential for accurately estimating MBF at rest and stress states, even from signals with dark rim artefacts. This could provide a protocol for reliable and easy estimation of MBF, although further research is needed to clinically validate the approach.<br /></p>
dc.identifier.eissn1573-9686
dc.identifier.jour-issn0090-6964
dc.identifier.olddbid209858
dc.identifier.oldhandle10024/192885
dc.identifier.urihttps://www.utupub.fi/handle/11111/49691
dc.identifier.urnURN:NBN:fi-fe2021042825329
dc.language.isoen
dc.okm.affiliatedauthorTarkia, Miikka
dc.okm.affiliatedauthorTeuho, Jarmo
dc.okm.affiliatedauthorSaunavaara, Virva
dc.okm.affiliatedauthorKnuuti, Juhani
dc.okm.affiliatedauthorDataimport, tyks, vsshp
dc.okm.discipline3121 Internal medicineen_GB
dc.okm.discipline3126 Surgery, anesthesiology, intensive care, radiologyen_GB
dc.okm.discipline3121 Sisätauditfi_FI
dc.okm.discipline3126 Kirurgia, anestesiologia, tehohoito, radiologiafi_FI
dc.okm.internationalcopublicationinternational co-publication
dc.okm.internationalityInternational publication
dc.okm.typeA1 ScientificArticle
dc.publisherSpringer
dc.publisher.countryUnited Statesen_GB
dc.publisher.countryYhdysvallat (USA)fi_FI
dc.publisher.country-codeUS
dc.relation.doi10.1007/s10439-020-02591-0
dc.relation.ispartofjournalAnnals of Biomedical Engineering
dc.source.identifierhttps://www.utupub.fi/handle/10024/192885
dc.titleQuantification of Myocardial Blood Flow by Machine Learning Analysis of Modified Dual Bolus MRI Examination
dc.year.issued2020

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