Performance of the Check-Direct ESBL Screen for BD MAXTM for detection of asymptomatic faecal carriage of extended-spectrum β-lactamase (ESBL)-producing Escherichia coli and Klebsiella pneumoniae

dc.contributor.authorGröndahl-Yli-Hannuksela Kirsi
dc.contributor.authorLönnqvist Emilia
dc.contributor.authorMarttila Harri
dc.contributor.authorRintala Esa
dc.contributor.authorRantakokko-Jalava Kaisu
dc.contributor.authorVuopio Jaana
dc.contributor.organizationfi=biolääketieteen laitos|en=Institute of Biomedicine|
dc.contributor.organizationfi=infektiotautioppi|en=Infectious Diseases|
dc.contributor.organizationfi=lääketieteellinen tiedekunta|en=Faculty of Medicine|
dc.contributor.organizationfi=tyks, vsshp|en=tyks, varha|
dc.contributor.organization-code1.2.246.10.2458963.20.13290506867
dc.contributor.organization-code1.2.246.10.2458963.20.77952289591
dc.contributor.organization-code2607100
dc.contributor.organization-code2607306
dc.converis.publication-id47055635
dc.converis.urlhttps://research.utu.fi/converis/portal/Publication/47055635
dc.date.accessioned2022-10-27T11:45:40Z
dc.date.available2022-10-27T11:45:40Z
dc.description.abstract<div><h3>Objectives</h3><p>Accurte diagnostic methods are crucial for the detection of extended-spectrum β-lactamase-producing Enterobacterales (ESBL-E). Besides culture-based gold-standard methods, new molecular gene detection tests are reaching the market. The aim of this study was to investigate the performance of the direct quantitative PCR (qPCR)-based methods Check-Direct ESBL and CPE Screen for BD MAXTM in relation to traditional culture-based methods for detection of ESBL-E faecal carriage.</p></div><div><h3>Methods</h3><p>Faecal samples were collected from healthy adult volunteers. Samples were cultured on chromogenic ESBL agar plates and were screened for ESBL-producing <em>Escherichia coli</em> and <em>Klebsiella pneumoniae</em>. Confirmed ESBL- and AmpC-producing isolates were further analysed using whole-genome sequencing. In addition, faecal samples were analysed using Check-Direct ESBL and CPE Screen for BD MAXTM and the results were compared with the gold-standard culture-based method.</p></div><div><h3>Results</h3><p>Of 176 faecal samples examined, 11 (6.3%) grew ESBL-producing <em>E. coli</em> or <em>K. pneumoniae</em> isolates. Among 173 analysed samples, Check-Direct ESBL Screen for BD MAXTM detected 22 (12.7%) ESBL-positive samples. No carbapenemase-producing isolates were detected. Two culture-positive samples remained negative with Check-Direct ESBL Screen for BD MAXTM. Culture-negative but qPCR-positive discrepancy was observed in 12 samples (6.9%). Altogether, concordant results were obtained for 158 samples (91.3%; 9 positive and 149 negative).</p></div><div><h3>Conclusion</h3><p>Check-Direct ESBL Screen for BD MAXTM is a fast screening method for ESBL carriage. However, several discrepant results were observed, which hinders interpretation. More clinical samples should be tested in combination with culture to evaluate the true benefits of this method.</p></div>
dc.format.pagerange408
dc.format.pagerange413
dc.identifier.jour-issn2213-7165
dc.identifier.olddbid171937
dc.identifier.oldhandle10024/155031
dc.identifier.urihttps://www.utupub.fi/handle/11111/29560
dc.identifier.urlhttps://www.sciencedirect.com/science/article/pii/S2213716520301077?via=ihub
dc.identifier.urnURN:NBN:fi-fe2021042821119
dc.language.isoen
dc.okm.affiliatedauthorGröndahl-Yli-Hannuksela, Kirsi
dc.okm.affiliatedauthorLönnqvist, Emilia
dc.okm.affiliatedauthorMarttila, Harri
dc.okm.affiliatedauthorRintala, Esa
dc.okm.affiliatedauthorRantakokko-Jalava, Kaisu
dc.okm.affiliatedauthorVuopio, Jaana
dc.okm.affiliatedauthorDataimport, tyks, vsshp
dc.okm.discipline3111 Biomedicineen_GB
dc.okm.discipline3111 Biolääketieteetfi_FI
dc.okm.internationalcopublicationnot an international co-publication
dc.okm.internationalityInternational publication
dc.okm.typeA1 ScientificArticle
dc.publisher.countryNetherlandsen_GB
dc.publisher.countryAlankomaatfi_FI
dc.publisher.country-codeNL
dc.relation.doi10.1016/j.jgar.2020.04.015
dc.relation.ispartofjournalJournal of Global Antimicrobial Resistance
dc.relation.volume22
dc.source.identifierhttps://www.utupub.fi/handle/10024/155031
dc.titlePerformance of the Check-Direct ESBL Screen for BD MAXTM for detection of asymptomatic faecal carriage of extended-spectrum β-lactamase (ESBL)-producing Escherichia coli and Klebsiella pneumoniae
dc.year.issued2020

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